Below are all the moves that Manaphy can learn in Generation V, which consists of:
Manaphy learns the following moves in Generation 5 at the levels specified:
| Lv. | Move | Type | Cat. | Power | Acc. |
|---|---|---|---|---|---|
| 1 | Bubble | Water | Special | 20 | 100 |
| 1 | Tail Glow | Bug | Status | - | - |
| 1 | Water Sport | Water | Status | - | - |
| 9 | Charm | Normal | Status | - | 100 |
| 16 | Supersonic | Normal | Status | - | 55 |
| 24 | BubbleBeam | Water | Special | 65 | 100 |
| 31 | Acid Armor | Poison | Status | - | - |
| 39 | Whirlpool | Water | Special | 35 | 85 |
| 46 | Water Pulse | Water | Special | 60 | 100 |
| 54 | Aqua Ring | Water | Status | - | - |
| 61 | Dive | Water | Physical | 80 | 100 |
| 69 | Rain Dance | Water | Status | - | - |
| 76 | Heart Swap | Psychic | Status | - | - |
Manaphy does not learn any egg moves.
Manaphy does not learn any tutor moves.
Manaphy does not learn any special moves.
Manaphy is compatible with these Generation 5 Hidden Machines:
| HM | Move | Type | Cat. | Power | Acc. |
|---|---|---|---|---|---|
| 3 | Surf | Water | Special | 95 | 100 |
| 5 | Waterfall | Water | Physical | 80 | 100 |
| 6 | Dive | Water | Physical | 80 | 100 |
Manaphy is compatible with these Generation 5 Technical Machines:
| TM | Move | Type | Cat. | Power | Acc. |
|---|---|---|---|---|---|
| 4 | Calm Mind | Psychic | Status | - | - |
| 6 | Toxic | Poison | Status | - | 90 |
| 7 | Hail | Ice | Status | - | - |
| 10 | Hidden Power | Normal | Special | - | 100 |
| 13 | Ice Beam | Ice | Special | 95 | 100 |
| 14 | Blizzard | Ice | Special | 120 | 70 |
| 15 | Hyper Beam | Normal | Special | 150 | 90 |
| 16 | Light Screen | Psychic | Status | - | - |
| 17 | Protect | Normal | Status | - | - |
| 18 | Rain Dance | Water | Status | - | - |
| 20 | Safeguard | Normal | Status | - | - |
| 21 | Frustration | Normal | Physical | - | 100 |
| 27 | Return | Normal | Physical | - | 100 |
| 29 | Psychic | Psychic | Special | 90 | 100 |
| 30 | Shadow Ball | Ghost | Special | 80 | 100 |
| 32 | Double Team | Normal | Status | - | - |
| 33 | Reflect | Psychic | Status | - | - |
| 42 | Facade | Normal | Physical | 70 | 100 |
| 44 | Rest | Psychic | Status | - | - |
| 48 | Round | Normal | Special | 60 | 100 |
| 53 | Energy Ball | Grass | Special | 80 | 100 |
| 55 | Scald | Water | Special | 80 | 100 |
| 56 | Fling | Dark | Physical | - | 100 |
| 68 | Giga Impact | Normal | Physical | 150 | 90 |
| 70 | Flash | Normal | Status | - | 100 |
| 77 | Psych Up | Normal | Status | - | - |
| 86 | Grass Knot | Grass | Special | - | 100 |
| 87 | Swagger | Normal | Status | - | 90 |
| 89 | U-turn | Bug | Physical | 70 | 100 |
| 90 | Substitute | Normal | Status | - | - |