PokéBase - Pokémon Q&A
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Excluding events, please.

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Under normal circumstances:

  • Lugia
  • Ho-Oh
  • Entei
  • Raikou
  • Suicune
  • Articuno
  • Moltres
  • Zapdos
  • Mewtwo
  • Groudon
  • Rayquaza
  • Latios

Legendary Pokémon also available but you need an Event Item or Pokémon to obtain:

  • Latias - (If you have downloaded the Enigma Stone WiFi Event, you can take the Enigma Stone to the Pewter City Museum. When there, you will meet Steven Stone and he will tell you about the Enigma Stone, give it to the attendant and it is found to be the legendary Soul Dew item. Once you receive the item and leave the Museum, Steven will stop you and tell you that Latios or Latias (depending on your game; Latios in HeartGold & Latias in SoulSilver) have arrived angrily. They will sit in Pewter City and you can challenge them. They are at Level 40.)
  • Dialga, Palkia and Giratina - (If you bring over the special Arceus given away for the 12th movie, you will unlock Dialga, Palkia or Giratina. This is done by going to the Sinjoh Ruins, hidden somewhere in Johto with Arceus on your team. You will encounter Cynthia who will tell you that Arceus has the ability of creating certain Pokémon. These Pokémon are Dialga, Palkia & Giratina. You have a choice of the Pokémon you can create but you can only create one so choose wisely. However, in addition to that, you can do this event twice. Once with the event Arceus and once with an Arceus obtained at the Hall of Origin in Sinnoh. They are at Level 1 and are holding their respective orbs so you won't have to worry about their strengths.)

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That answer though
Thanks :D
wait how do you even get the 3 legendary birds, groudon, and rayquaza in the first place?