In the simplest of explanations, they don't do that much damage on their own. These mostly refer to walls whose offensive stats aren't that great. Blissey is a prime example on this one. It mainly relies on toxic and seismic toss, sometimes it doesn't even carry toss, further increasing its passivity
Lugia makes its home in ubers and well, does ubers really mind taking any hit from someone whose offensive stats are only ninety? I'm thinking not really. On the other hand, Lugia is so fat so it is much more useful defensively
So, these passive Pokemon are mostly fat mons who relies mostly on passive damage to deal damage, whether that's by toxic stalling or by phazing or whatever