PokéBase - Pokémon Q&A
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Defeating the Pokemon League might make it come back.

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It's in a post-game area, meaning that you had to beat the league first to get to it in the first place. And I haven't heard of a legendary that respawned after you beat the league for a second time or onward. I'm pretty sure that Zygarde cannot respawn in USUM. I could definitely be wrong, but I don't see any way that it could. :(

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no just like in xy
if this happens, then use the gts or use Pokemon bank and transfer zygarde from xy, or sun moon.

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Are you sure that your answer is right? I'm pretty sure that you could rebattle Zygarde after knocking it out in X/Y.
no when i saved the first time i killed zygarde he disappeared