PokéBase - Pokémon Q&A
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Butterfree
Scythet
Gyarados
Hoppip
Skiploom
Jumpfluff
Yama
Gligar
Mantine
Buetifly
Maskerain
Ninjask
Mothim
Combee
Drifloon
Chatot
Yamega
Gliscor
Mantyke
Shaymin sky
Rotom fly
Emolga
This answer is better than my last :)

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Chatot can learn Fly. It says this on the Pokedex page and I have one in HeartGold that knows the move. I recommend you edit this.
Vespiquen cant learn it either